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RNA-Seq Analysis: CLC Genomics Workbench

This hands-on workshop will provide an introduction to RNA-Seq analysis using the library-licensed CLC Genomics Workbench. Participants will learn how to (1) import reads from an NCBI GEO dataset (GSE52778), (2) align RNA-Seq data to a reference genome, (3) calculate known genes and transcript expressions, (4) perform differential expression analysis, and (5) discover novel exons.

Please register for CLC Genomics Workbench, Biomedical Genomics Workbench and Correlation Engine.

You must also sign up for a Center for Research Computing HPC allocation.

Class Date: 
December 6, 2017 - 1:00pm to 4:00pm
Class Location: 
Falk Library, Classroom 2
Instructor: 
Ansuman Chattopadhyay
Class Type: 
Molecular Biology