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ArrayAssist Expression Software, from Stratagene, supports analysis of gene expression microarrays from any microarray platform. Highlights include:
- Easy-to-Use Clustering & Visualization Tools
- Powerful Statistical Analysis Tools
- Classification & Prediction-Based Modeling
- Scripting Capabilities & Custom Workflows
- Gene Annotations
- Integration with PathwayArchitect Software
Software Access
Please register to receive download instructions for Windows or Mac OS X.
Noteworthy Features
- Import data from all leading array platform technologies (CodeLink, Agilent, CombiMatrix, & Applied Biosystems) and from several scanner formats (GenePix, ImaGene, ScanAlyze, & QuantArray) or build your own custom templates.
- Multiple visualization tools including spreadsheet, scatter plot, 3D scatter plot, profile plot, heat map, histogram, profile match, spot image, annotation view, matrix, summary statistics, and bar chart.
- Volcano plots for interactive filtering based on significance and fold change.
- Annotation engine offers other functionalities such as PubMed correlation matrix, Gene Ontology (GO) browser, GO cluster, and pathway viewer through the KEGG database.
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