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BIOBASE Knowledge Library provides high quality content and integrated analysis tools spanning gene regulation and pathways to fully annotated genomes. Accessible databases include:
- TRANSPATH, the pathway databases
- PROTEOME, the proteomics databases
- TRANSFAC, the gene regulation databases
Software Access
Please register to receive installation instructions. Access is Web-based and password-dependent.
Noteworthy Features
- TRANSPATH, the world's leading signal transduction pathway database, and NetPro, the protein to protein interaction database, model complete regulatory networks.
- The PROTEOME suite of the six protein databases YPD, HumanPSD, WormPD, GPCR-PD, MycoPath PD and PombePD is the most comprehensive data collection on proteins available. The databases feature quality content, comprehensive references, disease information, Bioknowledge transfer and integrated resources.
- The TRANSFAC suite of databases includes TRANSCompel which focuses on composite elements, PathoDB which links gene mutations to their corresponding diseases, and S/MARt DB which is designed to analyze eukaryotic regulatory chromatin domains.
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