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AbMiner -- a bioinformatic resource on available monoclonal antibodies and corresponding gene identifiers for genomic, proteomic, and immunologic studies
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| Search for information on over 600 commercially available antibodies for protein microarray studies.
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AlgPred -- prediction of allergenic proteins and mapping of IgE epitopes
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| Predict allergens based on similarity of known epitope with any region of a protein and map the position of epitope in the protein.
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BCIpep -- A database of B-cell epitopes
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| Search for information on B-cell epitopes from a wide range of pathogens.
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CEP -- a conformational epitope prediction server
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| Predict conformational epitopes for protein antigens.
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DyNAVacS -- an integrative tool for optimized DNA vaccine design
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| Design DNA vaccines.
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EpiToolKit -- a web server for computational immunomics
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| A collection of methods from computational immunology for the prediction of MHC ligands or potential T-Cell epitopes.
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Epitome -- database of structure-inferred antigenic epitopes
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| Search for all known antigenic residues and the antibodies that interact with them including a detailed description of residues involved in the interaction and their sequence / structure environments.
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ExactAntigen -- a database of monoclonal antibody products
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| Search for comprehensive information about thousands of monoclonal antibody products.
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FIMM -- a database of functional molecular immunology
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| Search for comprehensive information and data from functional molecular immunology studies.
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GPX -- Macrophage Expression Atlas
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| Search for gene expression data based studies of a range of macrophage cell types following treatment with pathogens and immune modulators. |
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HBVRegDB -- Hepatitis B Virus Regulatory Sequence Database
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| Annotation, comparison, detection and visualization of regulatory elements in hepatitis B virus sequences.
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HIV Molecular Immunology Database
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| Search HIV immunology related information from an annotated collection of HIV-1 cytotoxic and helper T-cell epitopes and antibody binding sites. |
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HPtaa database -- potential target genes for clinical diagnosis and immunotherapy of human carcinoma
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| Search for information on Tumor-associated antigens in human. |
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IDR -- the ImmunoDeficiency Resource
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| Search for comprehensive knowledge and information on immunodeficiencies.
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IEDB-AR -- The Immune Epitope Database and Analysis Resource
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| A repository of web-based tools for the prediction and analysis of immune epitopes.
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IIDB -- The Innate Immune Database
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| A repository of genomic annotations and experimental data for over 2000 genes associated with immune response behavior in the mouse genome.
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IMGT -- ImMunoGeneTics Information System
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| Find information about human and other vertebrate immunogenetics.
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IMGT/3Dstructure DB and IMGT/StructuralQuery -- A Database and A Tool for Immunoglobulin, T Cell Receptor and MHC Structural Data
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| To search for structural information on immunoglobulins (IG), T cell receptors (TR), major histocompatibility complex (MHC) and related proteins of the immune system (RPI) of human and other vertebrate species. |
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IMGT/GeneInfo--V(D)J Recombination Database
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| Search and visualize human and mouse TRA/TRD and TRB loci of the TR and work on VDJ recombination.
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IMGT/HLA and IMGT/MHC -- Sequence databases for the study of the major histocompatibility complex
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| Search for sequences of the human major histocompatibility complex (HLA) and the major histocompatibility complex from a number of non-human primates, canines and feline sequences.
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IMGT/LIGM-DB, the IMGT® comprehensive database of immunoglobulin and T cell receptor nucleotide sequences
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| Search for nucleotide sequences of immunoglobulin (IG) and T cell receptor from human and other vertebrate species.
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IMGT/PRIMER-DB -- Immunogenetics oligonucleotide primer database
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| Search for information on oligonucleotides or primers of the immunoglobulins (IG) and T cell receptors (TR). |
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IMGT/V-QUEST -- Immunoglobulin and T Cell Receptor V–J and V–D–J Rearrangement Analysis
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| A highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis.
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IPD -- the Immuno Polymorphism Database
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| Search for information on polymorphic genes in the immune system. |
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InnateDB -- database of innate immunity interactions and pathways
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| Facilitating systems-level analyses of the mammalian innate immune response.
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Interferon Stimulated Gene Database
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| Search for information on interferon-stimulated genes identified using microarrays.
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JenPep -- A database of quantitative functional peptide data for immunology
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| Search for quantitative data on peptide binding to Major Histocompatibility Complexes (MHCs) and to Transmembrane Peptide Transporter (TAP), an annotated list of T-cell epitopes, as well as B-cell epitopes and peptide-MHC-TCR complex formation.
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Los alamos hepatitis C immunology database
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| Search curated inventory of immunological epitopes in HCV and their interaction with the immune system.
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LymphTF DB
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| A portal of information regarding transcription factor (TF) activity in the developing B and T cells (lymphocytes) in the mouse.
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MHC-Peptide Interaction Database version T (MPID-T)
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| Search for information on sequence-structure-function information on TcR/pMHC interactions and MHC-Peptide Interaction.
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MHCBN -- Comprehensive Database of MHC Binding and Non-binding Peptides
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| Search for published information on MHC binding and non-binding peptides.
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MHCP -- The MHC-Peptide Interaction Database
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| Search for curated x-ray crystallographic data on MHC peptide complexes.
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MHCPred -- a server for quantitative prediction of peptide–MHC binding
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| Quantitatively Predict peptide binding to major histocompatibility complexes (MHC).
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MULTIPRED -- a computational system for prediction of promiscuous HLA binding peptides
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| Predict peptide binding to multiple molecules (proteins) belonging to human leukocyte antigens (HLA) class I A2, A3 and class II DR supertypes.
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NIH AIDS Research and Reference Reagent Program
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| Search information on biological and chemical materials for study chemical materials for study of HIV and related opportunistic infections. |
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NetMHC-3.0 -- accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11
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| Predicts binding of peptides to a number of different HLA alleles using artificial neural networks (ANNs) and weight matrices.
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PEPVAC -- a web server for multi-epitope vaccine development based on the prediction of supertypic MHC ligands
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| Develop fully covering multi-epitope vaccines against pathogenic organisms based on genome wide predictions of promiscuous MHCI-restricted epitopes.
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PIGS -- Prediction of ImmunoGlobulin Structure
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| Automatic prediction of antibody structures.
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PREDBALB/c -- a system for the prediction of peptide binding to H2d molecules, a haplotype of the BALB/c mouse
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| Predict peptides binding to the major histocompatibility complex-2 (H2d) of the BALB/c mouse.
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PRRDB -- Pattern Recognition Receptor Database
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| A comprehensive database of pattern-recognition receptors and their ligands.
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Pcleavage -- an SVM based method for prediction of constitutive proteasome and immunoproteasome cleavage sites in antigenic sequences
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| Use a support vector machine based method to predict constitutive as well as immunoproteasome cleavage sites in antigenic sequences.
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Pepitope -- epitope mapping from affinity-selected peptides
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| Server for epitope mapping using affinity-selected peptides.
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REMUS -- a tool for identification of unique peptide segments as epitopes
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| Identify unique peptide segments as potential epitopes from a set of protein family sequences.
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SV40 Large T-Antigen Mutants Database
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| Search for viruses and plasmids expressing mutant forms of large T antigen. |
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SVMHC -- a server for prediction of MHC-binding peptides
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| Predict MHC-binding peptides.
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SePaCS—a web-based application for classification of seroreactivity profiles
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| Perform a Seroreactivity Profile Classification
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SuperHapten -- a comprehensive database for small immunogenic compounds
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| Search for curated information on structure, physicochemical properties and references on haptens.
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The Sequencing-based Typing Tool of dbMHC -- Typing Highly Polymorphic Gene Sequences
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| Evaluate the allelic composition of sequencing-based typing (SBT) results of cDNA or genomic sequences.
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The Sequencing-based Typing Tool of dbMHC -- Typing Highly Polymorphic Gene Sequences
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| Evaluate the allelic composition of sequencing-based typing (SBT) results of cDNA or genomic sequences.
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VBASE2 -- an integrative V gene database
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| Search for information on germ-line variable genes from the immunoglobulin loci of human and mouse.
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VIOLIN -- Vaccine Investigation and OnLine Information Network
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| A web-based vaccine database and analysis system
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dbNEI -- neuro-endocrine-immune database
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| A web-based knowledge resource specific for the NEI systems.
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