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URL:
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http://www.imtech.res.in/raghava/algpred/
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What you can do:
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Predict allergens based on similarity of known epitope with any region of a protein and map the position of epitope in the protein.
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Highlights:
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- AlgPred has been developed for the predicting allergenic proteins and for mapping IgE epitopes on allergenic proteins.
- It facilitates BLAST search against 2890 allergen-representative peptides (ARPs) obtained from Bjorklund et al 2005 and assign a protein allergen if it have a BLAST hit.
- Hybrid option of server allows to predict allergen using combined approach (SVMc + IgE epitope + ARPs BLAST + MAST).
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Keywords:
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- allergenic proteins prediction tool
- IgE epitopes mapping tool
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Literature and Tutorials:
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PubMed Link: AlgPred -- prediction of allergenic proteins and mapping of IgE epitopes
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