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URL:
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http://www.rostlab.org/services/CHOP/
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What you can do:
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Chop proteins into domain-like fragments.
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Highlights:
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- It cuts proteins from entirely sequenced organisms beginning from very reliable experimental information (PDB), proceeding to expert annotations of domain-like regions (Pfam-A) and completing through cuts based on termini of native protein ends.
- The CHOP server takes protein sequences as input and returns the dissections supported by homology transfer.
- CHOP results are precompiled for many entirely sequenced proteomes.
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Keywords:
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- protein domains
- protein sequence analysis tool
- domain assignment
- protein domain analysis tool
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Literature and Tutorials:
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PubMed Link: CHOP
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