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URL:
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http://www.ebi.ac.uk/InterProScan/
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What you can do:
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Identify protein family (and DNA) domains, patterns, motifs, protein families, and functional sites.
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Highlights:
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- InterProScan is a tool that combines different protein signature recognition methods from 10 InterPro consortium member databases into one resource.
- Protein as well as DNA sequences can be analyzed.
- In addition to the Web-based access, a standalone Perl version and a SOAP Web Service are also available to the users.
- Various output formats are supported and include text tables, XML documents, as well as various graphs to help interpret the results.
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Keywords:
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- protein domains prediction tool
- protein motifs prediction tool
- protein sequence analysis tool
- DNA sequence analysis tool
- protein structures analysis tool
- protein families
- protein functional sites prediction tool
- protein active sites prediction tool
- domain compositions
- protein domain architectures
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Literature and Tutorials:
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PubMed Link: The InterProScan
PubMed Link: InterProScan--an integration platform for the signature-recognition methods in InterPro
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