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URL:
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http://structure.bu.edu/cgi-bin/consensus/consensus.cgi
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What you can do:
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Find concensus regions among distantly related protein sequences.
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Highlights:
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- It produces high-quality alignments for comparative modeling, and identifies the alignment regions reliable for copying from a given template even when target–template sequence identity is as low as 5%.
- Combining the output from five different alignment methods, the server produces a consensus alignment, with a reliability measure indicated for each position and a prediction of the regions suitable for modeling.
- Users can upload a target protein sequence and specify a template (PDB code); if no template is given, the server will search for one.
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Keywords:
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- sequence alignment tool
- protein sequence alignment tool
- protein concensus sequence search tool
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Literature and Tutorials:
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PubMed Link: Consensus
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This record last updated: 05-25-2005
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