|
URL:
|
http://aba.nbcr.net/
|
|
What you can do:
|
Conduct multiple alignment of protein sequences with Repeated and Shuffled Elements.
|
|
Highlights:
|
- A-Bruijn Alignment (ABA) is a method for multiple sequence alignment that represents an alignment as a directed graph and has proved useful in aligning nucleotide and amino acid sequences that are composed of repeated and shuffled subsequences.
- AliWABA is a web server that provides tools to generate alignments with ABA, visualize the resulting ABA graphs and extract subsequences from ABA graphs.
- To facilitate the analysis of protein domains, AliWABA provides direct querying of the Conserved Domain Database
|
|
Keywords:
|
- sequence alignment tool
- multiple sequence alignment tool
- repeated sequences
- protein sequence alignment tool
- DNA sequence alignment tool
|
|
Literature and Tutorials:
|
PubMed Link: AliWABA -- alignment on the web through an A-Bruijn approach
|
