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URL:
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http://www.rostlab.org/services/LOCtarget/
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What you can do:
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Predict sub-cellular localization of proteins from their amino acid sequence.
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Highlights:
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- LOCtarget is a web server and database that predicts and annotates sub-cellular localization for structural genomics targets through a combination of four different methods: known nuclear localization signals (PredictNLS), homology-based transfer of experimental annotations (LOChom), inference through automatic text analysis of SWISS-PROT keywords (LOCkey) and de novo prediction through a system of neural networks (LOCnet).
- LOCnet is one of the methods used in LOCtarget that can predict sub-cellular localization for all eukaryotic and prokaryotic proteins.
- The LOCtarget database currently contains localization predictions for all eukaryotic proteins from TargetDB and is updated weekly.
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Keywords:
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- protein localizations
- protein localization prediction tool
- protein subcellular localization
- protein subcellular localization prediction tool
- nuclear localization signal
- signal peptide prediction
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Literature and Tutorials:
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PubMed Link: LOCnet and LOCtarget
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