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URL:
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http://locate.imb.uq.edu.au/
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What you can do:
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Search for data describing the membrane organization and subcellular localization of mouse and human proteins.
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Highlights:
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- The database contains high-quality localization data for 20% of the mouse proteome and general localization annotation for nearly 36% of the mouse proteome.
- The proteome annotated in LOCATE is from the RIKEN FANTOM Consortium Isoform Protein Sequence sets which contains 58,128 mouse and 64,637 human protein isoforms.
- Other features include computational subcellular localization predictions, automated computational classification of experimental localization image data, prediction of protein sorting signals and third party submission of literature data.
- Collectively, this database provides localization proteome for individual subcellular compartments that will underpin future systematic investigations of these regions.
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Keywords:
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- protein localizations
- protein subcellular localizations
- mouse protein subcellular localizations
- mammalian protein subcellular localization data warehouse
- mouse proteins
- mouse membrane proteins
- mammalian membrane proteins
- mouse proteome
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Literature and Tutorials:
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PubMed Link: LOCATE: a mouse protein subcellular localization database
2008 Update: LOCATE: a mammalian protein subcellular localization database
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