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URL:
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http://prometheus.brc.mcw.edu/denovoid/
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What you can do:
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Use degenerate amino acid sequence and mass data derived from mass spectroscopy experiments to search a peptide database.
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Highlights:
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- De novo peptide sequencing is an approach to determine partial peptide sequences for some of the unidentified spectra.
- DeNovoID is a program that has been specifically designed to use degenerate amino acid sequence and mass data derived from MS experiments to search a peptide database.
- DeNovoID also uses a geometric indexing scheme that reduces the number of calculations required to determine the best peptide match in the database.
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Keywords:
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- De novo peptide sequencing data analysis tool
- protein mass spectroscopy
- protein sequence analysis tool
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Literature and Tutorials:
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PubMed Link: DeNovoID -- a web-based tool for identifying peptides from sequence and mass tags deduced from de novo peptide sequencing by mass spectroscopy
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