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URL:
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http://biominer.bime.ntu.edu.tw/magiicpro/
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What you can do:
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Discover long patterns in protein sequences.
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Highlights:
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- MAGIIC-PRO aims to discover functional signatures of a query protein by sequential pattern mining.
- It employs a novel combination of intra- and inter-block gap constraints to discover functional long motifs that are interleaved by several large irregular gaps.
- The users can be directly guided to the patterns with as many blocks as that are conserved simultaneously.
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Keywords:
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- protein sequence analysis tool
- protein motif prediction tool
- long protein sequence pattern identification tool
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Literature and Tutorials:
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PubMed Link: MAGIIC-PRO -- detecting functional signatures by efficient discovery of long patterns in protein sequences
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