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URL:
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http://www.jvirgel.de/
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What you can do:
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Simulate and analyze proteomics data using virtual two-dimensional (2D) protein gels.
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Highlights:
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- JVirGel is collection of tools for the simulation and analysis of proteomics data. The software creates and visualizes virtual two-dimensional (2D) protein gels based on the migration behavior of proteins in dependence of their theoretical molecular weights in combination with their calculated isoelectric points.
- The calculated pattern of protein spots helps to identify unknown proteins and to localize known proteins during experimental proteomics approaches.
- Differences between the experimentally observed and the calculated migration behavior of certain proteins provide first indications for potential protein modification events.
- When possible, the protein spots are directly linked via a mouse click to the public databases SWISS-PROT and PRODORIC. Additional tools for the serial calculation and visualization of specific protein properties like pH dependent charge curves and hydrophobicity profiles are also provided.
- These values are helpful for the rational establishment of protein purification procedures.
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Keywords:
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- proteome map
- proteome analysis tool
- proteomics tool
- virtual two-dimensional protein gels
- protein purifications
- protein isoelectric points
- gel Electrophoresis
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Literature and Tutorials:
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PubMed Link: VirGel -- calculation of virtual two-dimensional protein gels
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