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HSLS Home
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Guides
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Molecular Biology
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OBRC: Online Bioinformatics Resources Collection
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Structure Databases and Analysis Tools
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Small molecules and others
OBRC
Email Suggestions
Recommend a New Resource
DNA Sequence Databases and Analysis Tools
Enzymes and Pathways
Gene Mutations, Genetic Variations and Diseases
Genomics Databases and Analysis Tools
Immunological Databases and Tools
Microarray, SAGE, and other Gene Expression
Organelle Databases
Other Databases and Tools (Literature Mining, Lab Protocols, Medical Topics, and others)
Plant Databases
Protein Sequence Databases and Analysis Tools
Proteomics Resources
RNA Databases and Analysis Tools
Structure Databases and Analysis Tools
Carbohydrates
Nucleic acid strutures (non-RNA)
Proteins
Small molecules and others
AANT -- the Amino Acid–Nucleotide Interaction Database
To search and visualize protein–nucleic acid structures and interactions.
CSD -- The Cambridge Structural Database -- The world repository of small molecule crystal structures
Search for structural information on organic molecules and metal-organic compounds.
ChEBI -- a database and ontology for chemical entities of biological interest
Search for information on natural or synthetic products used to intervene in the processes of living organisms.
ChemBank -- a small-molecule screening and cheminformatics resource database
Find data derived from small molecules and small-molecule screens.
HIC-Up -- Hetero-compound Information Center - Uppsala
Search for structure-related information about the small molecules interacting with larger biomolecules.
Klotho -- Biochemical Compounds Declarative Database
Search for information on stereochemically correct representation for small compound structures.
LIGAND -- Database of chemical compounds and reactions in biological pathways
Search for information on chemical compounds and their reactions in biological pathways.
LMSD -- LIPID MAPS structure database
Search for structures and annotations of biologically relevant lipids.
MMsINC -- Molecular Modeling Database
Find information about biomedically relevant chemical structures.
PDB-Ligand -- Small molecular ligand structures
Search for structural information of small molecular ligands in PDB.
PubChem -- A database of chemical structures of small organic molecules
Search for chemical structures of small organic molecules and information on their biological activities.
R.E.DD.B. -- a database for RESP and ESP atomic charges, and force field libraries
Source of RESP and ESP atomic charge values and force field libraries for model systems and/or small molecules.
STITCH -- search tool for interactions of chemicals
Integrates information about interactions from metabolic pathways, crystal structures, binding experiments and drug-target relationships.
SuperHapten -- a comprehensive database for small immunogenic compounds
Search for curated information on structure, physicochemical properties and references on haptens.
SuperScent -- Scent and Flavor Database
Search for information about volatile molecules.
The telomerase database
Tool for the study of structure, function and evolution of telomerase ribonucleoprotein.
sMOL Explorer -- small molecule explorer
An open source, web-enabled database and exploration tool for small molecules datasets.