AANT -- the Amino Acid–Nucleotide Interaction Database
To search and visualize protein–nucleic acid structures and interactions.
 
CSD -- The Cambridge Structural Database -- The world repository of small molecule crystal structures
Search for structural information on organic molecules and metal-organic compounds.
 
ChEBI -- a database and ontology for chemical entities of biological interest
Search for information on natural or synthetic products used to intervene in the processes of living organisms.
 
ChemBank -- a small-molecule screening and cheminformatics resource database
Find data derived from small molecules and small-molecule screens.
 
HIC-Up -- Hetero-compound Information Center - Uppsala
Search for structure-related information about the small molecules interacting with larger biomolecules.
 
Klotho -- Biochemical Compounds Declarative Database
Search for information on stereochemically correct representation for small compound structures.
 
LIGAND -- Database of chemical compounds and reactions in biological pathways
Search for information on chemical compounds and their reactions in biological pathways.
 
LMSD -- LIPID MAPS structure database
Search for structures and annotations of biologically relevant lipids.
 
MMsINC -- Molecular Modeling Database
Find information about biomedically relevant chemical structures.
 
PDB-Ligand -- Small molecular ligand structures
Search for structural information of small molecular ligands in PDB.
 
PubChem -- A database of chemical structures of small organic molecules
Search for chemical structures of small organic molecules and information on their biological activities.
 
R.E.DD.B. -- a database for RESP and ESP atomic charges, and force field libraries
Source of RESP and ESP atomic charge values and force field libraries for model systems and/or small molecules.
 
STITCH -- search tool for interactions of chemicals
Integrates information about interactions from metabolic pathways, crystal structures, binding experiments and drug-target relationships.
 
SuperHapten -- a comprehensive database for small immunogenic compounds
Search for curated information on structure, physicochemical properties and references on haptens.
 
SuperScent -- Scent and Flavor Database
Search for information about volatile molecules.
 
The telomerase database
Tool for the study of structure, function and evolution of telomerase ribonucleoprotein.
 
sMOL Explorer -- small molecule explorer
An open source, web-enabled database and exploration tool for small molecules datasets.
 

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