GFINDer -- genetic disease and phenotype location statistical analysis and mining of dynamically annotated gene lists
What you can do:
Automatically provide large-scale lists of user-classified genes with functional profiles biologically characterizing the different gene classes in the list.
Highlights:
- GFINDer automatically retrieves annotations of several functional categories from different sources, identifies the categories enriched in each class of a user-classified gene list and calculates statistical significance values for each category.
- GFINDer enables the functional classification of genes according to mined functional categories and the statistical analysis is of the classifications obtained, aiding better interpretation of microarray experiment results.
- For the 2005 Update:
- GFINDer implemented specific Genetic Disorders modules for the analysis of these structured data.
- Such modules allow to automatically annotate user-classified gene lists with updated disease and clinical information, classify them according to the genetic syndrome and the phenotypic location categories, and statistically identify the most relevant categories in each gene class.
Keywords:
- global gene expression analysis
- microarray data analysis tool
- gene annotations
- microarray data mining
- human genetic diseases
- human genetic disease genes
- human phenotype
- human gene annotation
Literature & Tutorials:
PubMed Link: GFINDer
PubMed Link of 2005 Update: GFINDer: genetic disease and phenotype location statistical analysis and mining of dynamically annotated gene lists
PubMed Link of 2005 Update: GFINDer: genetic disease and phenotype location statistical analysis and mining of dynamically annotated gene lists
This record last updated: 01-03-2006