SMD -- The Stanford Microarray Database
What you can do:
Store, annotate, view, analyze, and share microarray data.
Highlights:
- The primary mission of SMD is to be a research tool that supports researchers from the point of data generation to data publication and dissemination, but it also provides unrestricted access to analysis tools and public data.
- SMD functions as a resource for the entire scientific community, by making freely available all of its source code and providing full public access to data published by SMD users, along with many tools to explore and analyze those data.
- In the most recent update, the GenePattern software package has been incorporated directly into SMD, providing access to many new analysis tools, as well as a plug-in architecture that allows users to directly integrate and share additional tools through SMD.
Keywords:
- microarray data warehouse
- microarray data analysis tool
- microarray images
- microarray image analysis tool
- global gene expression analysis
- Gene Expression Profiling
Literature & Tutorials:
PubMed Link: The Stanford Microarray Database -- Data access and quality assessment tools
--2005 update: SMD 2005 UPDATE
--2007 update: The Stanford Microarray Database: implementation of new analysis tools and open source release of software
--2009 update: Implementation of GenePattern within the Stanford Microarray Database
--2005 update: SMD 2005 UPDATE
--2007 update: The Stanford Microarray Database: implementation of new analysis tools and open source release of software
--2009 update: Implementation of GenePattern within the Stanford Microarray Database
This record last updated: 04-18-2014