TRRD -- Transcription Regulatory Regions Database

What you can do:
Search for information on structural and functional organization of transcription regulatory regions of eukaryotic genes.
Highlights:
  • An entry of the database corresponds to a gene and contains the data on localization and functions of the transcription regulatory regions as well as gene expression patterns.
  • TRRD contains only experimental data that are inputted into the database through annotating scientific publication.
  • The 2003 release comprises the information on 2186 genes, 9480 transcription factor binding sites, 3254 regulatory regions, 14 locus control regions and 13173 expression patterns obtained through annotating 7301 scientific papers.
  • This information is arranged in seven databases: TRRDGENES (general gene description), TRRDLCR (locus control regions); TRRDUNITS (regulatory regions: promoters, enhancers, silencers, etc.), TRRDSITES (transcription factor binding sites), TRRDFACTORS (transcription factors), TRRDEXP (expression patterns) and TRRDBIB (experimental publications).
Keywords:
  • transcriptional regulation
  • transcription regulatory regions
  • transcription factor binding sites
  • transcription factor binding sites data warehouse
  • transcription factors
  • transcription factors data warehouse
  • promoter analysis
  • promoter elements
  • express patterns
  • cis-elements
  • cis-regulatory elements
  • regulatory elements
  • eukaryotic promoters
  • enhancers
  • silencers
Literature & Tutorials:
PubMed Link: TRRD
This record last updated: 06-28-2005

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