PAT -- a protein analysis toolkit for integrated biocomputing on the web
What you can do:
Conduct complex protein analyses and simplify the automation of repetitive tasks using a set of integrated protein analysis tools.
Highlights:
- PAT (for Protein Analysis Toolkit) is an integrated bio-computing server. It is designed as a streamlined analysis environment that implements many features which strongly simplify studies dealing with protein sequences and structures and improve productivity.
- PAT is able to read and write data in many bioinformatics formats and to create any desired pipeline by seamlessly sending the output of a tool to the input of another tool.
- PAT can retrieve protein entries from identifier-based queries by using pre-computed database indexes.
- Users can easily formulate complex queries combining different analysis tools with few mouse clicks, or via a dedicated macro language, and a web session manager provides direct access to any temporary file generated during the user session.
Keywords:
- protein analysis tools
- protein structure analysis tools
- protein sequence analysis tools
- protein sequence alignment tool
- protein Sequence motif prediction tool
- protein Phylogeny
- protein Secondary structure prediction tool
- Non globular structure prediction tool
- Solvent accessibility prediction tool
- protein Tertiary structure analysis tool
- Tertiary structure display
- protein structure alignment tool
- Tertiary structure superposition
- Tertiary structure modeling
- Tertiary structure evaluation
- protein Cellular localization
Literature & Tutorials:
This record last updated: 08-25-2005