FFAS03 -- a server for profile profile sequence alignments
What you can do:
Conduct protein alignment analysis, multiple sequence alignment, and comparative modeling.
Highlights:
- The FFAS03 server provides a web interface to the third generation of the profile-profile alignment and fold-recognition algorithm of fold and function assignment system.
- It enables detection of remote homologies beyond the reach of other methods.
- The FFAS03 server accepts a user supplied protein sequence and automatically generates a profile, which is then compared with several sets of sequence profiles of proteins from PDB, COG, PFAM and SCOP.
- The profile databases used by the server are automatically updated with the latest structural and sequence information.
Keywords:
- protein sequence homology
- protein homology analysis tool
- distant homology
- protein sequence analysis tool
- protein sequence alignment tool
- protein profile-profile alignments
- protein folding
- protein fold recognition tool
- protein profiles
Literature & Tutorials:
This record last updated: 04-21-2014