enoLOGOS -- a versatile web tool for energy normalized sequence logos
What you can do:
Generate sequence logos from DNA and protein sequences.
Highlights:
- enoLOGOS is a web-based tool that generates sequence logos from various input sources to graphically represent DNA and amino acid sequence patterns from a set of aligned sequences.
- enoLOGOS generates sequence logos from a variety of input data, including energy measurements, probability matrices, alignment matrices, count matrices and aligned sequences.
- Furthermore, enoLOGOS can represent the mutual information of different positions of the consensus sequence, a unique feature of this tool.
- Another web interface for our software, C2H2-enoLOGOS, generates logos for the DNA-binding preferences of the C2H2 zinc-finger transcription factor family members.
Keywords:
- sequence alignment visualization tool
- sequence pattern visualization tool
- C2H2 zinc-finger transcription factors binding sites
- zinc fingers DNA-binding proteins
- DNA-binding sites
Literature & Tutorials:
This record last updated: 11-17-2005