HvrBase++ -- a phylogenetic database for primate species
What you can do:
Retrieve and analyze human and primate mitochondrial DNA (mtDNA) and nuclear DNA (nDNA).
Highlights:
- HvrBase++ is a compilation of human and ape mtDNA control region , mitochondrial genomes and nDNA sequences.
- The current collection comprises 13,873 hypervariable region I (HVRI) sequences and 4940 hypervariable region II (HVRII) sequences.
- In addition, 1376 complete mitochondrial genomes, 205 sequences from X-chromosomal loci and 202 sequences from autosomal chromosomes 1, 8, 11 and 16 are also included.
- For the stored sequences, supplementary information such as geographic origin, population affiliation and language of the sequence donor can be retrieved.
- As a new key feature, HvrBase++ provides an interactive graphical tool to easily access data from dynamically created geographical maps.
Keywords:
- human mitochondrial DNA
- human mtDNA
- primate mitochondrial DNA
- primate mtDNA
- human nuclear DNA
- human nDNA
- primate nuclear DNA
- primate nDNA
- ape DNA
- neanderthaler DNA
- mtDNA control region
- mitochondrial genomes
- hypervariable region I
- HVRI
- hypervariable region II
- HVRII
- phylogeny
- organelle genomes
Literature & Tutorials:
PubMed Link: HvrBase: compilation of mtDNA control region sequences from primates
PubMed Link of 2006 update: HvrBase++ -- a phylogenetic database for primate species
PubMed Link of 2006 update: HvrBase++ -- a phylogenetic database for primate species
This record last updated: 02-20-2006