AlgPred -- prediction of allergenic proteins and mapping of IgE epitopes
What you can do:
Predict allergens based on similarity of known epitope with any region of a protein and map the position of epitope in the protein.
Highlights:
- AlgPred has been developed for the predicting allergenic proteins and for mapping IgE epitopes on allergenic proteins.
- It facilitates BLAST search against 2890 allergen-representative peptides (ARPs) obtained from Bjorklund et al 2005 and assign a protein allergen if it have a BLAST hit.
- Hybrid option of server allows to predict allergen using combined approach (SVMc + IgE epitope + ARPs BLAST + MAST).
Keywords:
- allergenic proteins prediction tool
- IgE epitopes mapping tool
Literature & Tutorials:
This record last updated: 07-21-2006