CorreLogo -- an online server for 3D sequence logos of RNA and DNA alignments
What you can do:
Generate a three-dimensional representation for a given RNA or DNA sequence alignment.
Highlights:
- This web server generates a 3D representation of properties of user-submitted RNA or DNA alignments.
- The visualized properties are information of single alignment columns, mutual information of two alignment positions as well as the position-specific fraction of gaps.
- The nucleotide composition of both single columns and column pairs is visualized with the help of color-coded 3D bars labeled with letters.
- The server generates both VRML and JVX output that can be viewed with a VRML viewer or the JavaView applet, respectively.
Keywords:
- RNA sequence alignment visualization tool
- DNA sequence alignment visualization tool
Literature & Tutorials:
This record last updated: 04-21-2014