BioMart -- A data warehousing system

URL:
http://www.biomart.org/
What you can do:
Use this open-source software to create a query-oriented data management system.
Highlights:
  • BioMart Central Portal offers a one-stop shop solution to access a wide array of biological databases.
  • These include major biomolecular sequence, pathway and annotation databases such as Ensembl, Uniprot, Reactome, HGNC, Wormbase and PRIDE.
  • The web server features seamless data federation making cross querying of these data sources in a user friendly and unified way.
  • It not only provides access through a web interface (MartView), it also supports programmatic access through a Perl API as well as RESTful and SOAP oriented web services.
Keywords:
  • data management system
  • data management software
  • query-oriented data management system
  • data warehousing system
Literature & Tutorials:
PubMed Link: BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
-- PubMed Link: BioMart Central Portal--unified access to biological data
This record last updated: 09-11-2009
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