PIDD -- database for Protein Inter-atomic Distance Distributions

URL:

http://orion.math.iastate.edu/pidd/

What you can do:

Search and analyze the statistical data for protein inter-atomic distances based on their distributions in databases of known protein structures such as in the PDB Data Bank.

Highlights:

Protein Inter-atomic Distance Distributions (PIDD) is a dedicated database and structural bio-informatics system for distance based protein modeling.
PIDD is capable of generating, caching, and displaying the statistical distributions of the distances of various types and ranges.
The collected information can be used to extract geometric restraints or mean-force potentials for protein structure determination including nuclear magnetic resonance structure determination and comparative model refinement.

Keywords:

protein structure modeling
protein structural data analysis
protein inter-atomic distances
geometric restraints
mean-force potentials

Literature & Tutorials:

PubMed Link: PIDD -- database for Protein Inter-atomic Distance Distributions

This record last updated: 03-21-2007

Report a missing or misdirected URL.