ISACGH -- InSilicoArray CGH
What you can do:
A web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.
Highlights:
- ISACGH is a web-based system that combines genomic data with gene expression values and provides different options for functional profiling of the regions found.
- Several visualization options offer a convenient representation of the results.
- Different efficient methods for accurate estimation of genomic copy number from array-CGH hybridization data have been included in the program.
- Moreover, the connection to the gene expression analysis package GEPAS allows the use of different facilities for data pre-processing and analysis.
- A DAS server allows exporting the results to the Ensembl viewer where contextual genomic information can be obtained.
Keywords:
- Cluster Analysis
- Gene Expression Profiling
- Nucleic Acid Hybridization
- Oligonucleotide Array Sequence Analysis
- Systems Integration
- array CGH
- gene expression
- functional profiling
Literature & Tutorials:
This record last updated: 06-05-2008