ZOOM! -- Zillions Of Oligos Mapped
What you can do:
Designed to map millions of short reads, emerged by next-generation sequencing technology, back to the reference genomes, and carry out post-analysis.
Highlights:
- We present a framework for how full sensitivity mapping can be done in the most efficient way, via spaced seeds.
- Using the framework, we have developed software called ZOOM, which is able to map the Illumina/Solexa reads of 15X coverage of a human genome to the reference human genome in one CPU-day, allowing two mismatches, at full sensitivity.
Keywords:
- genome mapping
- oligo mapping
- sequencing
Literature & Tutorials:
PubMed Link: ZOOM! Zillions Of Oligos Mapped
This record last updated: 08-15-2008