CressExpress -- Co-expression analysis for Arabidopsis

URL:

http://www.cressexpress.org/

What you can do:

A tool for large-scale mining of expression data from Arabidopsis.

Highlights:

CressExpress computes patterns of correlated expression between user-entered query genes and the rest of the genes in the genome.
It allows characterization of tissue-specific coexpression networks through user-driven filtering of input data based on sample tissue type.
CressExpress also performs pathway-level coexpression analysis on each set of query genes, identifying and ranking genes based on their common connections with two or more query genes.
This allows identification of novel candidates for involvement in common processes and functions represented by the query group.
Users launch experiments using an easy-to-use Web-based interface and then receive the full complement of results, along with a record of tool settings and parameters, via an e-mail link to the CressExpress Web site.
Data sets featured in CressExpress are strictly versioned and include expression data from MAS5, GCRMA, and RMA array processing algorithms.

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This record last updated: 11-26-2008