Protein properties
Identify a protein from its amino acid composition.
Search for information on property and similarity of amino acids expressed as numerical values.
Annotate the function of a protein from its composition using whole or part of the protein.
Find information about lysine acetylation.
Measure synonymous codon usage bias within and across genomes.
Search for curated sequence and structure information on cyclic proteins.
Use degenerate amino acid sequence and mass data derived from mass spectroscopy experiments to search a peptide database.
Use a collection of tools for protein analyses.
Estimate amino acid diversity in libraries with up to 6 variable codons.
Automatically predict protonation equilibrium pK constants of macromolecules based upon their atomic resolution Protein Data Bank (PDB) structures.
A web tool for protein state searching.
Generate the most probable trajectory between two states.
An on-line PHP application that optimizes the codon usage of a DNA sequence to increase its expression level.
Calculates and visualizes the electrostatic potential of your molecule by solving the Poisson-Boltzmann (PB) equation.
Perform protein electrostatic computations.
Estimate the number of distinct protein variants encoded by an error-prone PCR library.
Locate commonly predicted protein property information.
Find amino acid composition and Kyte & Doolittle hydropathy plot for an amino acid sequence.
Search for information on protein-nucleic acid interactions.
Identify and characterize proteins using mass spectra data from x91top-downx92 fragmentation of intact protein ions (i.e. without any tryptic digestion).
Search for thermodynamics information on wild type and mutant proteins.
Find the physico-chemical properties ( molecular wt, polarity, hydrophobicity, etc.) of an amino acid sequence by selecting appropriate tools.
A server and database for dipole moments of proteins.
Quickly locate charged and hydrophobic clusters in proteins.
Evaluate protein sequences by statistical criteria.
Search for thermodynamic data on enzyme-catalyzed reactions.
Software for protein engineering.
Integrate qualitative protein identification with quantitative protein analysis.
Conduct rapid evaluation of the effect of mutations on the stability, folding and dynamics of proteins and nucleic acids.
Provides essential information on more than 3800 mammalian proteins involved in cellular signaling.
Search for published methods employed in the refolding of recombinant proteins.
A web server for the comparison of protein interaction properties.