All of Us Researcher Workbench

HSLS Live Classes

'All of Us' Office Hours

All of Us office hours are for people with general questions about the database or more pointed questions about their analysis. These office hours are open to all Pitt or UPMC affiliates.

The All of Us Research Program, led by the National Institutes of Health, is a longitudinal cohort study aimed at advancing precision medicine and improving human health through partnering with one million or more diverse participants across the United States.

Event Details

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Alexis Cenname
This class will not be recorded.

Register

'All of Us' Office Hours

All of Us office hours are for people with general questions about the database or more pointed questions about their analysis. These office hours are open to all Pitt or UPMC affiliates.

The All of Us Research Program, led by the National Institutes of Health, is a longitudinal cohort study aimed at advancing precision medicine and improving human health through partnering with one million or more diverse participants across the United States.

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Alexis Cenname
This class will not be recorded.

Register

'All of Us' Office Hours

All of Us office hours are for people with general questions about the database or more pointed questions about their analysis. These office hours are open to all Pitt or UPMC affiliates.

The All of Us Research Program, led by the National Institutes of Health, is a longitudinal cohort study aimed at advancing precision medicine and improving human health through partnering with one million or more diverse participants across the United States.

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Alexis Cenname
This class will not be recorded.

Register

'All of Us' Office Hours

All of Us office hours are for people with general questions about the database or more pointed questions about their analysis. These office hours are open to all Pitt or UPMC affiliates.

The All of Us Research Program, led by the National Institutes of Health, is a longitudinal cohort study aimed at advancing precision medicine and improving human health through partnering with one million or more diverse participants across the United States.

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Alexis Cenname
This class will not be recorded.

Register

'All of Us' Office Hours

All of Us office hours are for people with general questions about the database or more pointed questions about their analysis. These office hours are open to all Pitt or UPMC affiliates.

The All of Us Research Program, led by the National Institutes of Health, is a longitudinal cohort study aimed at advancing precision medicine and improving human health through partnering with one million or more diverse participants across the United States.

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Alexis Cenname
This class will not be recorded.

Register

Introduction to All of Us Researcher Workbench

Level: Novice

Join us for a class on the All of Us Researchers Workbench - a cloud-based platform that provides researchers with access to data generated by the All of Us Research Program (AoURP). Led by the National Institutes of Health, AoURP is a longitudinal cohort study to advance precision medicine and improve human health by partnering with one million or more diverse participants across the United States. Whether you're new to the platform or an experienced user, this class will provide valuable insights into leveraging the All of Us Researcher Workbench for your research needs.

Upon completing this class, you should be able to:
  • Understand the structure of All of Us (AoU) data
  • Complete the onboarding process for accessing AoU data
  • Utilize cloud computing basics relevant to the AoU platform
  • Explore example applications of the All of Us Researcher Workbench
  • Examine the range of research questions that can be addressed using data generated by the All of Us Research Program (AoURP)
  • Use the HSLS created code template to analyze AoU data

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Ansuman Chattopadhyay
Class materials will be shared with attendees.
This class will be recorded and shared with attendees.
Register for this class

'All of Us' Office Hours

All of Us office hours are for people with general questions about the database or more pointed questions about their analysis. These office hours are open to all Pitt or UPMC affiliates.

The All of Us Research Program, led by the National Institutes of Health, is a longitudinal cohort study aimed at advancing precision medicine and improving human health through partnering with one million or more diverse participants across the United States.

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Alexis Cenname
This class will not be recorded.

Register

'All of Us' Office Hours

All of Us office hours are for people with general questions about the database or more pointed questions about their analysis. These office hours are open to all Pitt or UPMC affiliates.

The All of Us Research Program, led by the National Institutes of Health, is a longitudinal cohort study aimed at advancing precision medicine and improving human health through partnering with one million or more diverse participants across the United States.

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Alexis Cenname
This class will not be recorded.

Register

'All of Us' Office Hours

All of Us office hours are for people with general questions about the database or more pointed questions about their analysis. These office hours are open to all Pitt or UPMC affiliates.

The All of Us Research Program, led by the National Institutes of Health, is a longitudinal cohort study aimed at advancing precision medicine and improving human health through partnering with one million or more diverse participants across the United States.

Date:
Time: to
Mode: Zoom
Location: Online, Online - synchronous
Instructor: Alexis Cenname
This class will not be recorded.

Register

HSLS Self-Paced Learning

Applying Probability and Data with R to All of Us Datasets

Are you interested in using All of Us datasets, and perhaps in enrolling in other HSLS-run All of Us workshops, but need an introduction or review of skills in probability and R? You’re in the right place! 

We built this HSLS module as a companion to Massive Open Online Course (MOOC) 'Introduction to Probability and Data with R'. offered through Coursera and developed by Professor Mine Çetinkaya-Rundel of Duke University. This Duke course is perfect for those looking to learn R programming skills, with a focus on probability and data analysis. However, this course was not designed specifically for application to ‘All of Us’ workflows – that’s where this companion module comes in. By working through this companion module in parallel with the course, you will learn to apply the concepts from the course specifically to All of Us datasets. 

Format: Learning module with activities
Level: Novice
Upon completing this class you should be able to:
  • Recall simple functions in R for exploring any dataset.
  • Define the five main data domains in the All of Us database.
  • Classify AoU variables as categorical or numerical.
  • Calculate summary statistics for both categorical and numerical variables.
  • Apply data cleaning procedures to datasets in R, including filtering, removing missing values (NA), and managing duplicates.
  • Derive new variables from existing datasets.
  • Generate a new dataframe by merging various datasets.
  • Use random sampling techniques to accurately represent target distributions.
  • Describe the data preparation processes involved in the 'All of Us' code templates developed by HSLS.
Access this module