Command Line Basics - Online

Upcoming Classes

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This will be a flipped class – a prerecorded video and a hands-on workshop – which will cover the basics of command-line skills for data analysis. During this class, participants will learn how to:

  • access Center for Research Computing (CRC) clusters via Unix/Linux shell
  • transfer files to CRC using FileZilla software
  • create and manage files and directories
  • edit files using vi text editor
  • access CRC-installed open-source bioinformatics software such as FastQC, STAR, HISAT