A workshop designed to equip participants with essential skills in locating and analyzing gene expression studies using the Gene Expression Omnibus (GEO) repository.
Upon completing this class, you should be able to:
- find studies relevant to your topic in the Gene Expression Omnibus (GEO) repository.
- use tools such as GEO2R, Correlation Engine, and iDEP for retrieving and analyzing gene expression count data.
- create and interpret plots like PCA (Principal Component Analysis), heatmaps, volcano plots, and Venn diagrams.
- submit high-throughput gene expression data to the GEO repository.
Level
Novice
Recording status
This class will be recorded and shared with attendees.
Class Materials
Class materials will be shared with attendees.