trome, trEST and trGEN -- Databases of Predicted Protein Sequences

URL:
ftp://ftp.isrec.isb-sib.ch/pub/databases
What you can do:
Search and analyze hypothetical protein sequences.
Highlights:
  • The databases (trEST and trGEN) contain hypothetical protein sequences predicted from EST and HTG sequences, respectively.
  • trome uses alignments of EST data to HTG or full genomes to generate virtual transcripts and coding sequences.
Keywords:
  • ESTs
  • expressed sequence tags
  • EST mapping
  • high throughput genomic sequences
  • HTG
  • hypothetical protein sequences
  • hypothetical proteins
  • protein predictions
Literature & Tutorials:
PubMed Link: trome, trEST and trGEN
This record last updated: 05-25-2005
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