ConSite -- Web-based Prediction of Regulatory Elements using Cross-species Comparison
What you can do:
Find cis-regulatory elements in genomic sequences.
Highlights:
- Predictions are based on the integration of binding site prediction generated with high-quality transcription factor models and cross-species comparison filtering (phylogenetic footprinting).
- By incorporating evolutionary constraints, selectivity is increased by an order of magnitude as compared to single-sequence analysis.
- ConSite offers several unique features, including an interactive expert system for retrieving orthologous regulatory sequences.
Keywords:
- cis-elements prediction tool
- cis-elements
- cis-regulatory elements
- transcriptional factor binding sites
- promoter elements
- promoter analysis
- promoter analysis tool
- DNA-binding sites
- transcription regulation
- regulatory motifs
- regulatory elements
- regulatory sequences
Literature & Tutorials:
PubMed Link: ConSite
This record last updated: 05-10-2005