CD-Search -- Protein Domain Annotations on the Fly

What you can do:
Detect structural and functional domains in protein sequences.
  • CD-Search uses BLASTxae heuristics to provide a fast, interactive service, and searches a comprehensive collection of domain models.
  • Search results are displayed as domain architecture cartoons and pairwise alignments between the query and domain-model consensus sequences.
  • Search results may be visualized in further detail by embedding the query sequence into multiple alignment displays and by mapping onto three-dimensional molecular graphic displays of known structures within the domain family.
  • protein domains
  • protein structures
  • protein sequence alignments
  • protein conserved domains
  • protein domain data warehouse
  • protein domain annotations
  • protein annotations
Literature & Tutorials:
PubMed Link: CD-Search
This record last updated: 05-11-2005
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