CD-Search -- Protein Domain Annotations on the Fly
What you can do:
Detect structural and functional domains in protein sequences.
Highlights:
- CD-Search uses BLASTxae heuristics to provide a fast, interactive service, and searches a comprehensive collection of domain models.
- Search results are displayed as domain architecture cartoons and pairwise alignments between the query and domain-model consensus sequences.
- Search results may be visualized in further detail by embedding the query sequence into multiple alignment displays and by mapping onto three-dimensional molecular graphic displays of known structures within the domain family.
Keywords:
- protein domains
- protein structures
- protein sequence alignments
- protein conserved domains
- protein domain data warehouse
- protein domain annotations
- protein annotations
Literature & Tutorials:
PubMed Link: CD-Search
This record last updated: 05-11-2005