NetAffx -- Affymetrix probesets and annotations

What you can do:
Search for details of annotated probesets on Affymetrix GeneChip microarrays.
Highlights:
  • The annotations include (i) static information specific to the probeset composition; (ii) sequence annotations extracted from public databases; and (iii) protein sequence-level annotations derived from public domain programs, as well as libraries of hidden Markov models (HMMs) developed at Affymetrix.
  • For each probeset, NetAffx lists the probe sequences, and the consensus sequence interrogated by the probes; for the larger chip sets, interactive maps display this sequence data in genomic context.
  • Sequence annotations include Gene Ontology (GO) terms and depiction of GO graph relationships; predicted protein domains and motifs; orthologous sequences; links to relevant pathways; and links to public databases including UniGene, LocusLink, SWISS-PROT and OMIM.
Keywords:
  • microarray
  • microarray probes
  • Affymetrix GeneChip
  • Affymetrix microarrays
  • global gene expression
  • Affymetrix probes
  • GeneChip probes
Literature & Tutorials:
PubMed Link: NetAffx
This record last updated: 05-03-2005

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