Medicago -- A database for personalized data mining of the model legume Medicago truncatula transcriptome

URL:

http://www.medicago.org/

What you can do:

Search for integrated genomic, genetic and biological information on cool season legume Medicago truncatula (Mt).

Highlights:

MtDB is a relational database that integrates Mt transcriptome data and provides a wide range of user-defined data mining options. The database is interrogated through a series of interfaces with 58 options grouped into two filters.
A set of >170 000 Mt ESTs has been assembled based on in-depth sampling from various developmental stages and pathogen-challenged tissues.
Users can select and compare unigene sets generated by different assemblers: Phrap, Cap3 and Cap4. Sequence identifiers from all public Mt sites (e.g. IDs from GenBank, CCGB, TIGR, NCGR, INRA) are fully cross-referenced to facilitate comparisons between different sites, and hypertext links to the appropriate database records are provided for all queries' results.
MtDB's goal is to provide researchers with the means to quickly and independently identify sequences that match specific research interests based on user-defined criteria.

Keywords:

Literature & Tutorials:

PubMed Link: MtDB

This record last updated: 05-05-2005