The SYSTERS Protein Family Database in 2005

URL:
http://systers.molgen.mpg.de/
What you can do:
Partition of the whole protein sequence space by a fully automatic procedure.
Highlights:
  • The SYSTERS aims to provide a meaningful partitioning of the whole protein sequence space by a fully automatic procedure based on a refined two-step algorithm that assigns each protein to a family and a superfamily.
  • The sequence data underlying SYSTERS release 4 now comprise several protein sequence databases derived from completely sequenced genomes (ENSEMBL, TAIR, SGD and GeneDB), in addition to the comprehensive Swiss-Prot/TrEMBL databases.
  • A new access point, PhyloMatrix, allows the retrieval of phylogenetic profiles of SYSTERS families across organisms with completely sequenced genomes.
Keywords:
  • protein families
  • protein family
  • protein superfamilies
  • phylogenetic analysis
  • phylogenetic profiling
  • phylogenetic profiles
  • phylogenetics
  • phylogenetic studies
  • phylogeny
Literature & Tutorials:
PubMed Link: SYSTERS
This record last updated: 05-26-2005
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