NCBI GEO -- Gene Expression Omnibus
What you can do:
Search the largest public repository for high-throughput gene expression data.
Highlights:
- GEO hosts other categories of high-throughput functional genomic data, including those that examine genome copy number variations, chromatin structure, methylation status and transcription factor binding.
- These data are generated by the research community using high-throughput technologies like microarrays and, more recently, next-generation sequencing.
- The database has a flexible infrastructure that can capture fully annotated raw and processed data, enabling compliance with major community-derived scientific reporting standards such as 'Minimum Information About a Microarray Experiment' (MIAME).
- GEO allows users to explore, analyze and download expression data from both gene-centric and experiment-centric perspectives.
- The most recent update includes new data mining features.
Keywords:
- microarray data warehouse
- SAGE data warehouse
- high-throughput gene expression data analysis
- microarray data analysis tool
- SAGE data analysis tool
- mass spectrometry proteomic data analysis
- global gene expression analysis
- global gene expression profiles
- Gene Expression Profiling
- MIAME
Literature & Tutorials:
PubMed Link: NCBI GEO
-- 2007 update: NCBI GEO: mining tens of millions of expression profiles--database and tools update
-- 2009 update: NCBI GEO: archive for high-throughput functional genomic data
-- 2007 update: NCBI GEO: mining tens of millions of expression profiles--database and tools update
-- 2009 update: NCBI GEO: archive for high-throughput functional genomic data
This record last updated: 04-10-2009