RiceGAAS -- an automated annotation system and database for rice genome sequence
What you can do:
Search for reliable and up-to-date analysis of the rice genome sequence as well as to store and retrieve the results of annotation.
Highlights:
- The system has the following functional features: (i) collection of rice genome sequences from GenBank; (ii) execution of gene prediction and homology search programs; (iii) integration of results from various analyses and automatic interpretation of coding regions; (iv) re-execution of analysis, integration and automatic interpretation with the latest entries in reference databases; (v) integrated visualization of the stored data using web-based graphical view.
- RiceGAAS also has a data submission mechanism that allows public users to perform fully automated annotation of their own sequences.
Keywords:
- rice genome data warehouse
- rice genome
- rice genome annotation
- Oryza sativa genome
- rice gene prediction tool
- rice splice site prediction
- rice protein localization prediction
- rice full-length cDNA
Literature & Tutorials:
This record last updated: 06-01-2005