GlimmerM, Exonomy and Unveil -- three ab initio eukaryotic genefinders

What you can do:
Predict genes in DNA sequences with different software tools.
Highlights:
  • Three programs for ab initio gene prediction in eukaryotes: Exonomy, Unveil and GlimmerM.
  • Exonomy is a 23-state Generalized Hidden Markov Model (GHMM).
  • Unveil is a 283-state standard Hidden Markov Model (HMM)
  • GlimmerM is a previously-described genefinder which utilizes decision trees and Interpolated Markov Models (IMMs).
  • All three are readily re-trainable for new organisms and have been found to perform well compared to other genefinders.
Keywords:
  • gene prediction tools
  • gene discovery tools
  • gene identification tools
  • open reading frame analysis tools
  • eukaryotic gene prediction tools
  • eukaryotic genes
This record last updated: 06-15-2005
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