SVM-Prot -- web-based support vector machine software for functional classification of a protein from its primary sequence

What you can do:
Classify a protein into functional family from its primary sequence.
  • SVMProt classification system is trained from representative proteins of a number of functional families and seed proteins of Pfam curated protein families.
  • It currently covers 54 functional families and additional families will be added in the near future.
  • The computed accuracy for protein family classification is found to be in the range of 69.1x9699.6%.
  • SVMProt shows a certain degree of capability for the classification of distantly related proteins and homologous proteins of different function and thus may be used as a protein function prediction tool that complements sequence alignment methods.
  • protein function prediction tool
  • protein classification tool
  • protein family
  • protein sequence analysis tool
This record last updated: 06-16-2005
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