EUGxc8NE'HOM -- a generic similarity-based gene finder using multiple homologous sequences
What you can do:
Predict eukaryotic genes based on comparative analysis of homologous sequences.
Highlights:
- EUGENE'HOM is able to take into account multiple homologous sequences from more or less closely related organisms.
- It integrates the results of TBLASTX analysis, splice site and start codon prediction and a robust coding/non-coding probabilistic model which allows EUGENE'HOM to handle sequences from a variety of organisms.
- The current target of EUGENE'HOM is plant sequences.
- The global size of the genomic sequence to be annotated and the DNA sequences in multi-Fasta format are limited to 400 kb.
Keywords:
- Open Reading Frames
- Open Reading Frame prediction tool
- gene prediction tool
- coding sequence prediction tool
- gene discovery tool
- eukaryotic gene prediction tool
- plant gene prediction tool
- transcription starting sites
- splice sites
Literature & Tutorials:
This record last updated: 06-16-2005