InterProScan -- protein domains identifier
What you can do:
Identify protein family (and DNA) domains, patterns, motifs, protein families, and functional sites.
Highlights:
- InterProScan is a tool that combines different protein signature recognition methods from 10 InterPro consortium member databases into one resource.
- Protein as well as DNA sequences can be analyzed.
- In addition to the Web-based access, a standalone Perl version and a SOAP Web Service are also available to the users.
- Various output formats are supported and include text tables, XML documents, as well as various graphs to help interpret the results.
Keywords:
- protein domains prediction tool
- protein motifs prediction tool
- protein sequence analysis tool
- DNA sequence analysis tool
- protein structures analysis tool
- protein families
- protein functional sites prediction tool
- protein active sites prediction tool
- domain compositions
- protein domain architectures
Literature & Tutorials:
PubMed Link: The InterProScan
PubMed Link: InterProScan--an integration platform for the signature-recognition methods in InterPro
PubMed Link: InterProScan--an integration platform for the signature-recognition methods in InterPro
This record last updated: 09-15-2005