PRISM -- protein interactions by structural matching
What you can do:
Explore protein interfaces and predict protein-protein interactions.
Highlights:
- Prism is a website for protein interface analysis and prediction of putative proteinx96protein interactions.
- It is composed of a database holding protein interface structures derived from the Protein Data Bank (PDB).
- The server also includes summary information about related proteins and an interactive protein interface viewer.
- A list of putative proteinx96protein interactions obtained by running the prediction algorithm can also be accessed. These results are applied to a set of protein structures obtained from the PDB at the time of algorithm execution (January 2004).
- Users can browse through the non-redundant dataset of representative interfaces on which the prediction algorithm depends, retrieve the list of similar structures to these interfaces or see the results of interaction predictions for a particular protein.
- Another service provided is interactive prediction. This is done by running the algorithm for user input structures.
Keywords:
- protein-protein interactions
- protein-protein interaction prediction tool
- protein-protein interactions data
- protein interaction mapping tool
Literature & Tutorials:
PubMed Link: PRISM -- protein interactions by structural matching
This record last updated: 11-15-2005