GeneMark -- web software for gene finding in prokaryotes, eukaryotes and viruses
What you can do:
Predict genes in prokaryotic, eukaryotic and viral genomic sequences.
Highlights:
- The website provides interfaces to the GeneMark family of programs designed and tuned for gene prediction in prokaryotic, eukaryotic and viral genomic sequences.
- As of 2005, the server allows the analysis of nearly 200 prokaryotic and >10 eukaryotic genomes using species-specific versions of the software and pre-computed gene models.
- In addition, genes in prokaryotic sequences from novel genomes can be identified using models derived on the spot upon sequence submission, either by a relatively simple heuristic approach or by the full-fledged self-training program GeneMarkS.
- A database of reannotations of >1000 viral genomes by the GeneMarkS program is also available from the web site.
Keywords:
- gene prediction tool
- gene discovery tool
- gene scan tool
- gene identification tool
- prokaryotic gene prediction
- eukaryotic gene prediction
- viral gene prediction
- viral genome annotation
- annotated viral genomes
Literature & Tutorials:
This record last updated: 11-22-2005