Stitchprofiles.uio.no -- analysis of partly melted DNA conformations using stitch profiles
What you can do:
Perform computations on DNA melting, thus predict the localized separation of the two strands for DNA sequences.
Highlights:
- This Web server performs computations on DNA melting, thus predicting the localized separation of the two strands for sequences provided by the users.
- The output types are stitch profiles, melting curves, probability profiles, etc. Stitch profile diagrams visualize the ensemble of alternative conformations that DNA can adopt with different probabilities.
- For example, a stitch profile shows the possible loop openings in terms of their locations, sizes, probabilities and fluctuations at a given temperature.
- Sequences with lengths up to several tens or hundreds of kilobase pairs can be analyzed.
Keywords:
- DNA melting
- DNA melting curve calculation tool
- DNA denaturation prediction tool
- DNA temparature profile
Literature & Tutorials:
This record last updated: 12-19-2005