PANDIT -- an evolution-centric database of protein and associated nucleotide domains with inferred trees
What you can do:
Search for multiple sequence alignments and phylogenetic trees covering many common protein domains.
Highlights:
- PANDIT is a database of homologous sequence alignments accompanied by estimates of their corresponding phylogenetic trees.
- It provides a valuable resource to those studying phylogenetic methodology and the evolution of coding-DNA and protein sequences.
- Currently in version 17.0, PANDIT comprises 7738 families of homologous protein domains; for each family, DNA and corresponding amino acid sequence multiple alignments are available together with high quality phylogenetic tree estimates.
Keywords:
- protein sequence alignment
- multiple protein sequence alignments
- homologous sequence alignments
- protein phylogeny
- phylogenetic trees
- protein domains
- gene evolution
Literature & Tutorials:
This record last updated: 01-31-2006