TreeDomViewer -- a tool for the visualization of phylogeny and protein domain structure
What you can do:
Visualize structure and phylogeny of protein domains.
Highlights:
- TreeDomViewer, a visualization tool available as a web-based interface that combines phylogenetic tree description, multiple sequence alignment and InterProScan data of sequences and generates a phylogenetic tree projecting the corresponding protein domain information onto the multiple sequence alignment.
- TreeDomViewer adopts an evolutionary perspective on how domain structure of two or more sequences can be aligned and compared, to subsequently infer the function of an unknown homolog.
- This tool produces an interactive scalar vector graphics image that provides orthological relationship and domain content of proteins of interest at one glance.
- In addition, PDF, JPEG or PNG formatted output is also provided.
Keywords:
- protein domain structure analysis tool
- protein phylogeny visualization tool
- protein phylogenetic tree
- protein domain annotation
Literature & Tutorials:
This record last updated: 07-17-2006